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Exact(9)
The apparently unspecific binding of SeqA that appears after UV irradiation may represent binding of SeqA protein also to fully methylated DNA.
The functional SELEX motifs are more heterogeneous in nature but may represent binding sites for SF2/ASF that can lead to productive splicing.
The extra constraints detected in the TIR domain may represent binding sites for, as yet, uncharacterized proteins.
Nevertheless, it is also possible that pY296 and pY336 may represent binding sites for SH2 domain-containing signaling molecules thereby positively regulating the interactions of Caskin1.
Seven putative GC-boxes (GGGCGG) were detected which may represent binding sites for transcriptional regulators such as the specificity protein family members, SP1-SP4 [ 27].
The large numbers of motifs discovered by DREME that can be reliably assigned to TFs suggests that unassigned motifs may represent binding by other TFs whose motifs are not yet known.
Similar(51)
We often find that, even for a simple mechanism such as ER-binding, some descriptors may well represent binding dependencies for one structural class, whereas other features will better represent binding dependencies for a different structural class.
The steep response curves we observed in the FlashPlate assays are indicative of a cooperative ligand binding and therefore may represent the binding of indole to AgamOBP1 dimers and/or trimers [43].
The others may represent opportunistic binding in lysates or indirect binding through protein protein contacts between Cbr-GLD-1 and other RBPs.
Diverse ligands with distinct scaffolds modulating one target may represent alternative binding modes for the same active site, but on occasion may also indicate binding at an allosteric site or a pharmacologically distinct function.
Each of the two large hydrophilic domains contains a sequence that is homologous to a single cytoplasmic domain of several guanylyl cyclases; these sequences may represent nucleotide binding sites.
Related(20)
may reflect binding
may interrupt binding
may allow binding
may affect binding
may become binding
may accompany binding
may reinforce binding
may alter binding
may enhance binding
may block binding
may increase binding
may mediate binding
may preserve binding
may favor binding
may create binding
may disturb binding
may regulate binding
may promote binding
may support binding
may occupy binding
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