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Magnitude and direction of gene expression changes found using microarray analysis compared to qRT-PCR with designed primers.
A previous microarray analysis compared the gene expression profiles of retinae from PN11 rd1 and wt animals.
Microarray analysis compared gene expressions of transcription factor knockout mutants rim101Δ [ 44] and tup1Δ [ 48] to the respective wild type under various in vitro conditions.
Probably because of the technical pitfalls of viral microarray analysis (Ohyashiki et al, 2005a), some discrepancy was seen in the genes detected by microarray analysis compared with the results obtained from RT-PCR studies.
This might be due to the limited dynamic range of the hybridization technique used for microarray analysis compared to the range of qPCR, which can exceed more than 5 orders of magnitude.
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A microarray analysis comparing wild and hatchery coho salmon was performed [29] to assess global effects on gene expression.
In a microarray analysis comparing gene expression in the CNS of HIV-infected individuals with neuropathologically confirmed HIV-encephalitis, our group reported changes in transcription of genes involved in signaling and the cytoskeleton (Accession Number GDS1726) [45].
Finally, in order to identify additional downstream effectors in the Pten−/− ECCs that emerge with differentiation, we performed microarray analysis comparing wild type and mutant SSEA1/c-kit double positive sorted cells after 4 days of differentiation in RA (Fig. 4G).
Our previous microarray analysis comparing the expression patterns of ES cells and Trophoblast Stem (TS) cells [38] identified 1,411 genes as expressed predominantly in ES cells and 1,882 genes as expressed predominantly in TS cells (FDR<0.01) [39], [39].
We performed a microarray analysis comparing ODN CpG-2006-treated CpG-2006-treated CpG-2006-treated
Microarray analysis comparing global expression levels across cell lines revealed notable differential expression profiles.
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