Sentence examples for iterative alignment from inspiring English sources

The iterative alignment option aligns sequences against the reference sequences in a pre-determined order.

More strikingly, we noted a strong clustering of variants in smaller regions where we had extended sequence from the ends of aligned segments during the iterative alignment process and where we had replaced sequence with the JR-assembled contigs.

Another alignment strategy is iterative alignment, where progressive alignments are built and then iteratively refined to attempt to remove errors that are introduced in the growing progressive alignment [23].

An iterative alignment method was applied to our data to produce accurate aligned data.

Iterative alignment Small misalignments of the focal series may already cause severe artifacts in the phase image as demonstrated by Barty et al. [42].

A structural characterization of this transition to the inward-facing conformation was obtained with the RMSDTT algorithm [53] that performs an iterative alignment of structures, giving larger weight to regions that have small residue-based RMSDs.

These combined protein sets were aligned using three iterative alignments in Clustal Omega v1.2 [ 30], a program that allows for high-quality alignments of large numbers of protein sequences.

Unlike de novo assemblers or the iterative alignment-based assembly done by IMR, our approach works by doing a one-time global alignment which is used to predict SVs and correct them directly to create a personal genomic sequence.

In subsequent iterative alignments, these particles were replaced by the 'low defocus' particles.

Sequence alignment in eRNA therefore includes the methods of separate and iterative alignments (the panel "Step III" in Figure  2).

Comparison of the convergent iterative alignments obtained by these PSI-BLAST searches revealed that the vertebrate, yeast, and Arabidopsis proteins have similarities in their N-terminal one-third regions.