Ai Feedback
Exact(9)
The three modules identified using this alternative method have a substantial overlap (normalized mutual information
For the timecourse data set, the miRmR modules obtained using a combination of miRanda, PicTar, TargetScanS and miRGen were different from that obtained using TargetMiner.
In our prior work, we found that the modules obtained using the ShReD method was more likely to contain retroactively connected pairs of nodes, i.e. cyclical pathways, compared to Newman's method [ 3].
Comparisons of modules obtained using several different flux sets representing distinct metabolic states identified robust reaction pairs that repeatedly partitioned into the same module across many levels of modular hierarchy, suggesting possible co-regulation.
Since the DE miRNAs and mRNAs that were provided as input for clustering were different for the two data sets, the miRmR modules obtained using the two data sets were different.
Applied to a model of adipocyte metabolism, ShReD-based modules obtained using flux weights more consistently reflected recognizable functions of established pathways compared to the modules obtained without the weights.
Similar(50)
Significant modules are obtained using two complementary significance tests, one which uses the topological structure of the network into account and another which does not (this one randomizes the statistics over the network) [ 13].
The selection module is obtained using the theory of evidence framework [59]: the eventual decision is finalized by taking into account the confidence associated to the outputs of ten binary SVM-based classifiers, which correspond to the ten binary problems that stem from a problem with five classes.
A potential major advantage of definition (Eq. 37) is that the individual dataset modules need not be obtained using the same module detection procedure.
Comparison of the kinetic responses of each of the three modules to Δ ψ obtained using mitochondria isolated from different cybrids reveals any effects of mitochondrial haplogroup on the kinetics of oxidative phosphorylation.
The final module P values were obtained using the standard calculation, P(Z m) = 1-Φ(Z S), where Φ is the normal cumulative density function.
Related(13)
Write better and faster with AI suggestions while staying true to your unique style.
Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com