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Exact(6)
These markers were assumed to be associated with the mating type loci A and B (Aimi et al. 2005; James et al. 2004), with the mating system of the Termitomyces symbiont being assumed to be tetrapolar heterothallism.
Monomorphic variants were excluded from the analyses, and all markers were assumed to be in linkage equilibrium.
These markers were assumed to be available for all individuals and their genotypes were called via processes similar to those used for either SNP arrays or GBS.
For the simulated dataset 1, the estimate of the relative polygenic weight ω was about 0, as was expected since in the simulation the markers were assumed to capture all the genetic variation.
For such calculations, a 30 Morgan genome was assumed, the average reliability of the animals in the training set were considered as the heritability of pseudo-phenotypes, and markers were assumed to capture 80% of the genetic variance for all traits.
The remaining 9,925 markers were assumed to contribute equally (i.e., \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\frac{1}{9925 } $$\end{document } 1 9925) to the remaining genetic variance.
Similar(54)
In both cases, linkage equilibrium between markers was assumed.
The second method is the multithreshold association test where the markers are assumed to be causal.
The mutation rate at the markers was assumed to be 2.5 × 10-3 [ 2].
As a starting point, error terms in different markers are assumed to be independent.
When we only simulate additive effects, but not epistasis, the markers are assumed to be independent.
Related(20)
markers were hypothesized
manifestations were assumed
markers were assimilated
markers were assigned
parameters were assumed
markers were demonstrated
markers were estimated
markers were suggested
markers were measured
markers were selected
markers was assumed
markers were related
markers were fastened
markers were increased
markers were observed
markers were investigated
markers were sorted
markers were determined
markers were considered
markers were designed
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