Sentence examples for by the comparative mapping from inspiring English sources

The map obtained by the comparative mapping approach is 728 cR long.

The traditional maximum multipoint likelihood criterion was replaced by the comparative mapping criterion using dsbplambda command, lambda set to 1.

The high degree of sequence identity and similarities in marker order revealed by the comparative mapping with chicken performed in the present study demonstrates that the intra-chromosomic rearrangements are also rare.

The information provided by the comparative mapping of D. buzzatii BES onto the D. mojavensis genome allows us to assess the presence or absence of overlaps or gaps between contigs and estimate gap size.

Genotyping data for ten APL12 microsatellites and thirty-one markers designed from 18 scaffolds aligned to GGA11 were successfully obtained using the Pre-ampFLDMqPCR method and used to generate a RH map by the classical approach with the Carthagene software [ 41] and by the comparative mapping approach.

An extended conservation of synteny between Sscr13 and Hsap3 was already shown by the comparative map of Van Poucke and co-workers [ 11], based on chromosome painting results of Goureau and co-workers [ 12].

The comparative mapping is followed by a statistical confidence measure of a distribution of maps to evaluate map uncertainties and produce a robust map, such as described in Servin et al. (2010) [ 66].

The comparative mapping of Brassica by using genetic markers has successfully revealed homologous rearrangements, translocations, and fusions that are crucial to the diversification of the A, B, and C genomes from A. thaliana [ 13- 15].

The marker positions in the consensus map obtained using MergeMap were verified using the DAG files generated by the MergeMap tool and by using the comparative maps (Additional file 7) generated using MapChart.

By using a sliding window scanning the comparative map, we obtained the distribution of presumable ISNR regions (regions that average mismatch density ≤ 1.5/ Kb) in the rice genome.

If we consider the actual chromosome length based on sequence assembly, these chromosomes are shorter than previously estimated, with values of 12.4 and 37.3 Mb, the ratio is thus now closer to the value we obtain here for GGA5. Figure 3 and figure 4 (see additional file 2) synthesize the comparative maps generated by us between GGA5 and its human and mouse counterparts.