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Exact(4)
If the mecA PCR was negative the strain was removed from the analysis.
Subsequently, the latter strain was removed from the formulation, leaving STI-1 as the only LAV component.
The genomically encoded Km marker in the Δ acrA strain was removed using the pCP20, and the plasmid pKD46 was introduced into the resulting strain.
Due to the low representation of the S. kudriavzevii genome fraction in AMH, this strain was removed from this first analysis.
Similar(55)
In Set 1, strain adaptive resorption was modelled, whereby elements which were subject to the lowest mechanical stimulus (principal strain) were removed.
Thus, systematic assembly errors (duplicated regions due to a second low-coverage strain) were removed manually as follows.
Equal numbers of each strain were removed, 5-fold serially diluted and then spotted to YPD plates.
Subcutaneous tumours formed 1 month after injection of tumour cells into male nude mice of KSN strain were removed and fixed in 10% buffered formalin for 24 h.
Subcutaneous tumours formed 1 month after injection of UMSCC81B-GR3 tumour cells into nude mice of KSN strain were removed and fixed in 10% buffered formalin for 24 h.
In silico fragment analysis of the PCR products was performed to predict band sizes for AF16 and HK104; assays with more than 4 bands in either strain were removed.
Variant sites were filtered based on the following criteria: Mapping quality above 30, site quality score above 30, at least four reads covering each site with at least two reads mapping to each strand but with maximum depth of coverage 200, at least 75% of reads supporting site (DP4), allelic frequency (AF1) of 1. Sites which failed these criteria in any strain were removed from the analysis.
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