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Exact(8)
In addition, five significant markers with unknown map positions were detected.
Markers with unknown physical positions were not removed but given an appropriate position, as described below.
Correlations of genotypes (coded 0,1,2) were used and not the LD measure r[ 20], because haplotypes are unknown for markers with unknown positions.
All markers with unknown locations (i.e. not in the STS data from NCBI) were aligned to the Btau 3.1 assembly using MegaBLAST and BLASTN.
In order to also use markers with unknown physical position for imputation, their positions were approximated using LD information, as described below.
SNP markers with unknown position and/or more than 10% missing data and/or Gentrain scores below 0.6 were excluded from all the analyses.
Similar(52)
Supporting their immature character, 45% of VLCs express CD133+ (15 80%), a stem-cell marker with unknown function, absent in mature endothelium or committed myeloid cells.
In order to enable imputation, the position of a marker m′ with unknown position on the identified chromosome was then set equal to the known position of a marker m from the same chromosome that maximized Cor G m, G m ′.
(i) There is the possible problem that the hottest F2s might have their markers in trans, with unknown consequences.
Thus it is important to note that within the present study, benzodiazepines might be better conceptualized as a marker of risk with unknown direct causal links to death from overdose.
Similarly, a systems genomic BLUP model, including two G matrices built with markers with known or unknown biological function, was proposed theoretically, which can account for and differentiate SNPs with known biological roles in the phenotypic or disease outcomes (Kadarmideen 2014).
Related(19)
parameters with unknown
markers with uncertain
landmarks with unknown
marking with unknown
markers with different
markers with permanent
markers with certain
markers with identical
markers with thin
markers with minor
markers with multiple
markers with sufficient
markers with black
markers with high
markers with tremendous
markers with unfavorable
markers with adequate
markers with deep
markers with well known
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