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The redundant markers with identical scores were removed since they cannot provide any additional information.
In each family, sets of markers with identical genotypes were identified in subsequent mapping steps.
Markers with identical primers were considered to be the same, regardless of marker name.
A similarity matrix was then produced using DARwin 5 software [ 39] to eliminate markers with identical patterns.
Most of the markers with identical scores in Kanota and Ogle had the 'plus' allele in both parents.
As the number of markers with identical alleles increases, the probability that the two fictitious alleles for A are IBD also increases.
Similar(44)
At least two independent experiments were performed for each marker, with identical results.
'Redundant' markers (those with identical map positions to their respective framework markers) and lower quality 'attached' markers (those with less well-supported map positions) were integrated into the most appropriate positions in framework marker map.
Marker sequences for the 2,589 SNPs included on the CATIE Type 2 linkage map were blasted to each assembled genome to determine marker position, and all of the linkage groups that contain a mapped marker are displayed with identical markers connected by grey lines (Fig. 8).
Second, the proportion of marker pairs, with identical linkage phase within both heterotic groups, was calculated for each bin.
We therefore conclude that the Cy5 dyes can be coupled to the GFP-ZE markers with near-identical efficiencies through sequential rounds of circuit-based labeling.
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