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Given that these microsatellite and SNP markers were predicted from transcriptomic sequences, they are likely linked to protein-coding genes, and therefore might have substantial physiological implications.
SSR markers were predicted and developed using Read2Marker software with the default parameters [ 50].
Several of these gene expression markers were predicted to be orthologs of Arabidopsis genes with characterized functions.
Four markers were predicted to produce 16 different multilocus profiles, considering homozygosity and heterozygosity at each locus.
The cucumber Gy14 and 9930 draft genome scaffold locations of these 401 markers were predicted by in silico PCR or BLAST searches of the cucumber draft genome sequences.
The failure to detect significant association near IL1B and IL1RN (Fig. 4C,D) suggests these genes unlikely contribute strong risk, especially as the tag markers were predicted to be within 0.1 0.2 Mb (NC_007309.4; Elsik et al. 2009).
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Based on the optical map of F. solani f. sp. pisi (FSSC 11; also known as ' Nectria' haematococca Mating Population VI (NhMPVI)), the six new markers are predicted to reside on four different chromosomes.
However, the peak awn marker is predicted to be approximately five genes away from the ZCCT genes underlying the major vernalization response locus VRN-A m2 in wheat (Cockram et al. 2010b).
Because this study was intended to survey broadly across the entire genus, gene markers that were predicted to be monomorphic among V. vinifera were discarded.
Gains from more markers can be predicted using simulation, whereas strategies to use fewer markers have been compared using subsets of actual genotypes.
Selective genotyping using sparse markers has been predicted to be effective for GS [ 78].
Related(20)
markers were expected
markers were described
markers were indicated
markers were estimated
markers were determined
markers were calculated
markers were projected
markers were directed
labels were predicted
markers were inferred
gauges were predicted
landmarks were predicted
markers were evaluated
markers were observed
markers were investigated
markers were sorted
markers were studied
markers were designed
markers were examined
markers were λ
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