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They then utilised the opinion of 16 different software engineers, with programming experiences ranging from 2 to 15 years, to manually evaluate the refactoring solutions generated for the first few iterations by marking each refactoring as good or bad.
Automatic annotation pipelines provide useful evidence of potential functions for genes and proteins, but in a last essential step, the scientist must manually evaluate the available information.
This method requires the operator to manually evaluate the coregistration between the various PET bins and the CT using normal structures such as the liver dome.
For the GO task, database curators had to manually evaluate the automatically extracted evidence passages to determine if they correctly supported the annotations, as exemplified in Figure 4 (36).
For candidate annotations with no matches in the reference databases, we extracted a random sample and submitted it to expert curators to manually evaluate the quality of the predictions.
Due to the limited availability of experimentally-determined human protein structures [ 28], an assortment of 3D structure sources was used to manually evaluate the effects of single point mutations found in specific proteins (Additional file 2: Table S1).
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We only considered peptides with double and multiple charges, and manually evaluated the expression values by inspecting the areas of integration that the software had chosen and by adjusting them as needed.
Once again, the two neurologists from the working team manually evaluated the results.
The user then manually evaluates the quality of ranking or of clustering.
We automatically as well as manually evaluated the secondary phenotype predictions and can demonstrate that our results show viable candidates.
We generated a list of candidate term pairs for an English-Swedish dictionary and MN manually evaluated the list.
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