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Next-generation sequencing (NGS) was used to characterize virus strains molecularly.
Different molecular techniques were used by participating institutes to characterize virus from outbreaks in 2000.
These programs rely on serological assays to characterize virus subtypes, establishing seroprevalence and evaluating vaccine efficacy [ 8, 11, 17].
In its sensitive detection mode (see the user's manual at [ 30]), VirusFinder runs VERSE to characterize virus integration loci.
As the core module of VirusFinder 2, VERSE is utilized by VirusFinder 2 to characterize virus integration loci (in its sensitive detection mode; see user's manual at [ 30]).
Moreover, from our previous experience with sampling groundwater, we concluded that multiple water samples over time would be necessary to accurately characterize virus exposure.
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To characterize virus-specific cellular T cell cytokine induction kinetics, one million PBMCs from 4 HIV positive individuals were stimulated with the predefined HIV CD8+ peptide epitope pool for 12 hours; and ex vivo cultured cells were harvested at hourly intervals for the first six hours and then once every two hours up to 12 hours.
Such weak TCR pMHC affinities are not usually characteristic of CD8+ T cells specific for foreign, pathogen-derived antigens, and pMHC-I tetramers have excelled when used to characterize virus-specific cytotoxic T lymphocyte (CTL) populations.
Another way to characterize viruses is to visualize them with an electron microscope (EM) (Bradley 1965).
Nevertheless, E-Predict has been successfully applied to identify or characterize viruses in thousands of ViroChip experiments.
Definitions required for each element included scoring criteria that characterize viruses as low, moderate, and high risk to assist the experts in estimating a score on a scale of 1 10.
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