A next generation sequencing platform (Ion Torrent PGM™) was used to generate a partial genome survey sequence (GSS) dataset to develop microsatellite markers from R. kanagurta genomic DNA.
Detecting the preparation phase of an MRI sequence was tested with a standard survey sequence (for brain) using the PET/RF insert "Hyperion I" inside a Philips 3T Achieva MRI.
The following GenBank databases were searched: non redundant, EST, genome survey sequence, high-throughput genomic sequence, patent, whole genome shotgun, sequence tagged site and environmental sequences.
A homology search based on genomic survey sequence analysis and human miRNA secondary structure was used to map the miRNA genes.
Entrez lists 1,232,016 expressed sequence tag records (EST), 355,026 Genome Survey Sequence records (GSS) and 231,927 records in protein sequence databases for rice but no chemical substances in the PubChem record.
The total acquisition time, including the initial survey sequence, was 3 minutes.
Finally, we mapped 1696 annotated genes on the survey sequence contigs to the physical map.
Recently, a genome survey sequence of common wheat chromosome 7D was published.
Although genome survey sequence is available, wheat does not contain a completed physical map.
The survey sequence data were highly informative for determining the genomic composition of chromosome 6B.
Gene information on 6B survey sequence contigs were assigned to BAC contigs based on the information of the WGP tags uniquely mapped to 6B survey sequence contigs with 100%% identity and 100%% coverage.
