specified mutation rate

USAGE SUMMARY

The phrase "specified mutation rate" is correct and usable in written English.
It can be used in scientific or technical contexts when discussing a particular rate of mutation that has been defined or identified. Example: "The experiment was designed to observe the effects of the specified mutation rate on the population's genetic diversity."

✓ Grammatically correct

Science

Human-verified examples from authoritative sources

Exact Expressions

3 human-written examples

For each set of parameter values, we used DWGSIM (http://sourceforge.net/apps/mediawiki/dnaa/index.php?title=Whole_Genome_Simulation) to generate human and mouse reads from the corresponding references according to the specified mutation rate, read length and error rate from the specified regions (whole genomes or exomes).

BMC Genomics

In the first stage, a spatially structured population was allowed to evolve until patterns of diversity reached a quasi-equilibrium state reflecting expected number of alleles and heterozygosity based on the simulated population size and specified mutation rate.

Plosone

At the L − 1 neutral loci, mutations are introduced at random positions into the gametes with the specified mutation rate u.

Genetics

Human-verified similar examples from authoritative sources

Similar Expressions

57 human-written examples

This will pull up a menu where where you can start a new run of 100 generations at a time, after specifying fitnesses, mutation rates, migration rates, and initial frequency of the A allele.

Massachusetts Institute of Technology

Furthermore, we specified the recurrent mutation rate to be 10−5 per locus per generation.

Genetics, Selection, Evolution

The inferred coefficient of variation (c v ^ = 1.2 ) and skewness (γ ^ = 0.81 ) do not completely specify the underlying mutation rate distribution, but we can examine either a gamma distribution or a worst-case distribution consisting of two point masses, one of which is at μ = 0.05/(4 Ne).

Genome Biology and Evolution

Produces a negative class of in silico passenger mutations by random nucleotide substitution in a library of expressed human mRNA transcripts from NCBI RefSeq, according to the distributions specified in the passenger mutation rate table (Supplementary Material ).

Bioinformatics

We define an overall mutation rate per gene and specify the relative ratio at which point mutations, duplications, deletions, and rearrangements take place.

Genome Biology and Evolution

For example, shown as Table 3, if the mutation rate is specified as 0.01, and the base vector is ( left( { 5 { 3 3}} right) ), the chromosomes ( left( { 4 { 2 1}} right) ), ( left( { 2 { 1 2}} right) ), after mutation may be ( left( { 3 { 2 1}} right) ), ( left( { 2 { 2 2}} right) ).

Journal of Modern Power Systems and Clean Energy

Therefore, no mutation rate was specified for the microsatellite loci.

BMC Biology

To account for uncertainty in the actual mtDNA mutation rate, we specified a standard deviation of 20%% of the mean rate.

BMC Evolutionary Biology

Expert writing Tips

Best practice

When using the phrase "specified mutation rate", ensure that the context clearly indicates how and why the mutation rate was specified, and what parameters were used to determine its value.

Common error

Avoid using "specified mutation rate" without providing details on how the rate was determined or justified. Always include relevant information about the methods and assumptions used to arrive at the specified rate.

Linguistic Context

The phrase "specified mutation rate" functions as a noun phrase where "specified" modifies "mutation rate". It denotes a particular mutation rate that has been explicitly defined or chosen for a specific purpose. Ludwig examples demonstrate its use in scientific contexts to describe simulation parameters and experimental setups.

Expression frequency: Uncommon

Frequent in

Science

100%

Less common in

News & Media

0%

Formal & Business

0%

Academia

0%

Ludwig's WRAP-UP

The phrase "specified mutation rate" is a grammatically correct and usable term, primarily found in scientific contexts. Ludwig AI highlights its function as a noun phrase emphasizing precision in settings like simulations and experiments. Given its formal and scientific register, it's crucial to provide clear context on how the rate was determined. While alternatives like "defined mutation rate" exist, "specified mutation rate" effectively communicates a predetermined value. Although uncommon, its usage underscores the importance of detail in technical discussions, as further supported by Ludwig.

More alternative expressions

Phrases that express similar concepts, ordered by semantic similarity:

defined mutation rate

Replaces "specified" with "defined", emphasizing the act of clearly stating the mutation rate.

designated mutation rate

Uses "designated" instead of "specified", focusing on the assignment of a particular mutation rate.

prescribed mutation rate

Substitutes "specified" with "prescribed", indicating a mutation rate that is set or recommended.

given mutation rate

Replaces "specified" with "given", suggesting a mutation rate that is already established or known.

predetermined mutation rate

Uses "predetermined" instead of "specified", emphasizing that the rate was decided in advance.

established mutation rate

Replaces "specified" with "established", focusing on a mutation rate that is recognized or validated.

assigned mutation rate

Substitutes "specified" with "assigned", indicating a mutation rate that has been allocated or attributed.

set mutation rate

Uses "set" instead of "specified", simply indicating that the mutation rate has been configured to a particular value.

custom mutation rate

Highlights that the mutation rate is tailored to meet specific requirements.

calibrated mutation rate

Indicates the mutation rate has been precisely adjusted using empirical measurements or comparative data.

FAQs

How is the phrase "specified mutation rate" typically used in scientific writing?

The phrase "specified mutation rate" is used to indicate a mutation rate that has been pre-defined or determined for use in experiments, simulations, or models. It's important to provide context on how the rate was determined. For instance, 'For each set of parameter values, we used DWGSIM to generate human and mouse reads from the corresponding references according to the "specified mutation rate", read length and error rate from the specified regions.'

What are some alternatives to saying "specified mutation rate"?

You can use alternatives like "defined mutation rate", "designated mutation rate", or "predetermined mutation rate" depending on the context.

In what contexts is it appropriate to use the term "specified mutation rate"?

It is appropriate in scientific, academic, and technical contexts when describing simulation parameters, experimental designs, or theoretical models where a particular mutation rate has been chosen or calculated. Always ensure that the specification process is clear to the reader.

Why is it important to clearly define or specify the mutation rate in research?

Clearly defining or specifying the mutation rate is crucial for reproducibility and transparency in research. It allows other researchers to replicate experiments, validate models, and compare results across different studies. It also helps in understanding the sensitivity of results to changes in mutation rates.