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Exact(19)
Table 1 also shows the number of connections of the nine most connected genes (central genes) in the network from Figure 2B.
The number of connections of the nine most connected genes (central genes) is presented in Table 1 IFN-γ and TNFα had the greatest number of connections (35 and 32, respectively).
Among the top 660 (10%) most connected genes in the Always correlated Landscape, there were 70 TF, implying an over-representation hypergeometric test p-value of 8.66E-6 8.66E-6
The next most connected genes are CDC2 (58 edges), CCNB1 (49 edges), LGALS1 (48 edges), and MYBL2 (42 edges).
Within this new network, the component with most connected genes was identified and considered as biologically important regulation module.
We selected for network analysis the 5000 most connected genes in each of the fasted and fed states.
Similar(41)
We similarly compare the 1000 most highly connected genes in the differentiation (blue) module and the 1000 genes that are most significantly up regulated upon Oct4 RNAi in the Ivanova network.
A nonessential, fork-associated scaffold, CTF4, is among the most highly connected genes.
Visualization of module 4 illustrates that sls is one of the most highly connected genes.
Here we selected the top 100 most highly connected genes in both modules.
We next used a previously described method (41) to identify modules of the most highly connected genes in the network.
Related(15)
most related genes
most connected ones
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most studied genes
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most correlated genes
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