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424: 788–793) using truly irreversible RGCs (insertions of mobile elements) for a relatively small number of species.
This might be explained by the fact that latter systems use mobile elements for which an insertion sequence specificity was identified (IS 31831 and IS 1249).
In addition, various studies have demonstrated the importance of horizontal transfer of genes via mobile elements, for example in virulence [ 2], adaptation [ 3] and most well-known in conferring antibiotic resistance [ 4].
The genome reveals an unexpectedly high number of mobile elements for an endophytic bacterium; it is in fact the endophyte with the highest frequency of mobile genes per Mb of genome.
Since the estimation of phylogenetic relationships was not the main aim of this analysis, we used an a-priori fixed tree topology as obtained from mobile elements for the calculation from nuclear sequence data.
The differential presence of the 71 GIs across multiple strains demonstrates the importance of these mobile elements for shaping the genetic composition of individual strains and populations within this bacterial species.
Similar(51)
The actual mechanisms of horizontal transfer are still unknown for mobile elements from eukaryotes since it is not possible experimentally to show how the horizontal transmission can occur.
A similar problem has been successfully addressed by Li and co-workers [ 32], who aimed at the recovery of ancestral sequences for rice mobile elements from whole genome shotgun sequences.
Because these functions are often co-located on the same mobile elements, selection for 1 phenotype inadvertently selects for its unintended (and often unrecognized) companion.
These mobile elements identified for macrolide transfer can contribute to mobilization of the genes studied here.
Plasmids and other mobile elements encoding for specific resistance determinants were clearly visible during this comparison.
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