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Proteogenomic analysis confirmed the quality of annotation and improvement pipelines, identifying a missing gene and an alternative reading frame.
Actually, how well the estimator works directly depends on the number of observed entries in the missing gene and the correlation information between conditions.
GCM2 is homologous to the Drosophila glial cells missing gene and encodes a transcription factor implicated in parathyroid gland development, and mutations in GCM2 have been reported in familial hypoparathyroidism [ 28, 29].
In this first matrix, 44 of the ingroup taxa were represented by all eight genes used in the analyses, four taxa had one missing gene, and one taxon had two missing genes.
Furthermore, the reconstructed network must express the biology and physiology of S. platensis C1; for instance, whether or not the predicted pathways or reactions present in S. platensis C1 and the numbers of incomplete pathways (missing gene and reaction) indicate a disconnection in the network.
Considering the economy of microbe metabolism, we conjectured that it was not likely that the whole biosynthesis of LPS should be interrupted by one single missing gene and therefore there might be other mechanism that hydrolyzed the phosphate group of 3-deoxy-D-manno-octulosonae-8P.
Similar(52)
Normalized microarray data were further filtered for missing genes and for genes exhibiting low expression levels.
Normalized microarray data were further filtered for missing genes and for genes with low expression levels.
There are several possible sources for the missing genes, and this is a subject of intense argument and ongoing research.
If genes are missing or poorly annotated in the reference GenBank file, the Plann output will also be missing genes and be poorly annotated.
From this table we removed the columns (experiments) with more than 5% missing genes and the lines (genes) with more than 5% missing experiments.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com