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Exact(5)
The minimum nucleotide divergence between the Ugandan viruses and the D2 reference strain was 3.1% for the N gene and 2.6% for the H gene (Table 2).
The minimum nucleotide divergence between the Menglian viruses and the D7 WHO reference strain (Victoria.AUS/16.85) was 3.3% for the N gene and 3.0% for the H gene (Table 3).
The minimum nucleotide divergence between the Menglian viruses and the most closely related reference strain, genotype D7, was 3.3% for the N gene and 3.0% for the H gene.
The minimum nucleotide divergence between the Ugandan viruses and the most closely related reference strain, genotype D2, was 3.1% for the N gene and 2.6% for the H gene. Therefore, Ugandan viruses should be considered a new, proposed genotype (d10).
Our results show that the percentage sequence divergence between the N and H gene sequence of the Ugandan virus isolates and the sequences of the reference strains exceeds the recommended threshold for designation of a new measles genotype, which is 2.5% and 2.0% minimum nucleotide divergence for the COOH region of the N and H genes, respectively (7, 8, 16 ).
Similar(55)
Most extant genera have representative fossils that date to the tertiary with some dating to the early Permian indicating a minimum of 50-60 million years of morphological evolution that might enable us to observe greater nucleotide divergence than one would expect in more recently derived species [28] [30].
K: nucleotide divergence calculated by Jukes and Cantor method between two species as shown in subscript; sat = O.
In particular, the nucleotide divergence between the species is almost 5% at a mitochondrial DNA gene (Zink and Blackwell 1998).
OsC1 nucleotide divergence was up to 90%% lower in GSH than PSH although twice as many GSH accessions were studied (Table 2).
Based on percentage of genetic divergence of this F gene fragment, the maximum intra-genotype nucleotide variations within any old genotype (below 7%) is lower than the minimum nucleotide distance found between these genotypes and the MG group (12% to 25%).
Different miRNA* sequences showed different levels of nucleotide divergence.
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