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I was interested in everything, from conservation biology to microbial ecology to molecular evolution.
Agricultural microbiology is presented as a synthetic research field responsible for knowledge transfer from general microbiology and microbial ecology to the agricultural biotechnology.
As the price of DNA sequencing continues to fall, metagenomics now allows microbial ecology to be investigated at a much greater scale and detail than before.
Deep sequencing of DNA extracted from complex microbial communities enables many aspects of microbial ecology to be determined.
Chemical fumigation has been the primary method used for control of ARD, and manipulating soil microbial ecology to reduce pathogen density and aggressiveness is being investigated.
This idea was central to the initial interest of molecular microbial ecology to many other fields (e.g. earth sciences, oceanography, agricultural sciences and medicine).
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One of the most important challenges in contemporary microbial ecology is to assign a functional role to the large number of novel genes discovered through large-scale sequencing of natural microbial communities that lack similarity to genes of known function.
Nevertheless, the severe biases and the large gaps in the worldwide collection of cultivated isolates make it difficult to fully appreciate evolutionary processes and microbial ecology, or to exploit the large repertoire of microbial genes that might be relevant to medicine and biotechnology.
It may require a great deal of sustained effort, in terms of resources and research manpower, to expand the available knowledge in microbial ecology and to obtain an exhaustive description of the global regulatory pathways operating in bacteria (Storz & Hengge, 2011) in order to design potent predictive tools.
Microbial ecology used to be a small and specialized field that struggled to identify more than a tiny proportion of the Earth's microbial biodiversity.
Microbial ecology strives to characterize and explain microbial communities.
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