Sentence examples for measure of backbone from inspiring English sources

Rather than restrict the permitted values, a measure of backbone strain is used to allow users the choice of what models to accept and reject.

Using the number of residues per α-helical turn as a measure of backbone strain exploits a parameter that is generated during backbone construction at little computational cost.

Models are scored for feasibility with a measure of backbone strain, a test for KIH packing, and two atom-based forcefields.

In CCBuilder, this is provided through the combination of a measure of backbone strain, checking for KIH packing and the choice of two all-atom scoring functions.

Three methods are applied to test model validity: a measure of backbone strain, testing for KIH packing, and two all-atom scoring functions.

In a first part of the paper, we fit a measure of backbone gene order conservation (hereinafter called backbone stability) against phylogenetic distance for over 3000 genome comparisons, improving existing models for the divergence in time of backbone stability.

As second measure of the backbone anisotropy, the monodomain sample was physically extended.

We have developed a statistical measure of residual backbone entropy in folded proteins by using the ϕ ψ distributions of the 20 amino acids in common secondary structures.

Additionally, we calculated the change in root-mean-square fluctuation of all Cα atoms as a measure of altered backbone flexibility following mutation according to ΔRMSF = RMSF (mutant) — RMSF (wild-type).

C NMR has many advantages for a metabolomics study, including a large spectral dispersion, narrow singlets at natural abundance, and a direct measure of the backbone structures of metabolites.

The H/DX-MS technique allows analysis of protein conformational dynamics in solution by measuring the exchange of backbone amide hydrogens with the deuterium bulk solvent.