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Character mapping and phylogenetic optimization of these data was conducted using TNT version 1.0 [51] on a phylogeny adapted from Turner et al. [22] for Coelurosauria.
SNPs are extremely useful for association studies, gene mapping and phylogenetic studies.
Our EST and marker databases provide useful tools for genetic mapping and phylogenetic studies of the guppy.
In order to test this, we employed the recent Bayesian extensions of the comparative method, allowing to take mapping and phylogenetic uncertainty simultaneously into account [ 16].
Despite the successful application of QTL mapping and phylogenetic comparative methods to fundamental questions in evolutionary biology, the two frameworks are rarely integrated.
PIC analysis can be used to evaluate markers so that the most appropriate marker can be selected for genetic mapping and phylogenetic analysis (Anderson et al. 1993; Powell et al. 1996).
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The information used for the nomenclature is shown in the comparative genomic maps and phylogenetic trees.
We have constructed a global synteny map and phylogenetic analysis for miRNAs across 80 animal species.
We used species distribution maps and phylogenetic trees to generate species and phylogenetic diversity measures for 1 ° × 1 ° cells across mainland Asia.
Taken together these analyses of cytogenetic maps and phylogenetic trees provide strong support for a model in which the three Myb genes of vertebrates arose by at least two regional duplication events that occurred prior to the divergence of modern vertebrate animal species (Davidson et al., 2005).
Cytogenetic map and phylogenetic sequence analyses imply that the three Myb genes of vertebrate animals arose by regional chromosomal duplications (or possibly by whole genome duplications), rather than by tandem gene duplications or retrotransposition events (Figs 1, 2; supplementary material Figs S1, S2).
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