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We prepared sequencing libraries from three HapMap samples using both methods, sequenced the libraries on the Illumina Genome Analyzer, mapped the sequencing reads back to the genome, and called variants in the sequences.
MH mapped the sequencing reads to the reference genome.
EAH assembled the transcriptomes and mapped the sequencing reads, and participated in the study design.
In the comparison, we directly mapped the sequencing reads to the hg19 human reference genome using BWA [ 24] with mismatches allowed.
For each of the experimental groups, we mapped the sequencing reads to the Zv9 zebrafish genome using Tophat2 [ 19] and counted the number of reads aligning with each annotated gene region using SeqMonk [ 20].
We mapped the sequencing reads, known plant miRNA mature sequences and hairpin sequences from miRBase (Release18) to B. rapa genome sequences (v1.1), then merged the 3 mapping results to identify the conserved miRNA loci.
Similar(52)
The model explicitly mapped the sequence to folding stability and fitness.
We mapped the sequences of hairpins instead of miRNAs to the mouse genome (mm7) using Blastn program.
We previously mapped the sequences of four transcriptional units from the A and B subfamilies onto their genomic blocks [ 15].
In our previous analyses, we first converted colors to bases directly, and mapped the sequences in base space.
Next, we used the ABI SOLiD System to perform massively parallel ligation sequencing and mapped the sequence reads to human reference sequence [release Mar. 2006 (NCBI36/hg18)].
Related(20)
implemented the sequencing
planned the sequencing
evaluated the sequencing
measured the sequencing
mapped the sequences
estimated the sequencing
completed the sequencing
mapped the surface
mapped the leaf
mapped the process
mapped the workload
mapped the trench
mapped the landscape
mapped the scene
mapped the murine
mapped the eelgrass
mapped the seabed
mapped the genome
mapped the change
mapped the jungle
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