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To investigate the relationships between the outbreak isolates, we mapped the sequenced reads to the reference chromosome sequence for S. Typhiumurium strain SL1344 (phage type DT44, accession NC_016810.1).
We performed Illumina sequencing and subsequently mapped the sequenced reads to the current Hessian fly genome assembly to predict transcripts and analyze gene expression profiles.
We mapped the sequenced reads to the official miRNA repository and the corresponding species' annotated miRNAs using PatMaN (Prüfer et al. 2008) allowing zero mismatches.
To further investigate the scale and pattern of antisense transcription, we obtained reads from strand-specific (unidirectional) cDNA libraries of four different stages of P. falciparum and mapped the sequenced read pairs to the parasite reference genome.
In order to determine the tyrP copy number in the 18 newly sequenced genomes of human Cpn isolates we mapped the sequenced reads specifically against the entire tyrP locus of CWL029, containing two tyrP gene copies (Additional file 1: Table S10).
Similar(55)
MH mapped the sequencing reads to the reference genome.
EAH assembled the transcriptomes and mapped the sequencing reads, and participated in the study design.
The model explicitly mapped the sequence to folding stability and fitness.
We mapped the sequences of hairpins instead of miRNAs to the mouse genome (mm7) using Blastn program.
We previously mapped the sequences of four transcriptional units from the A and B subfamilies onto their genomic blocks [ 15].
In our previous analyses, we first converted colors to bases directly, and mapped the sequences in base space.
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