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10 neonatal images were manually segmented to test the accuracy of automatic atlas-based segmentation by using 4 different atlases.
Magnetic resonance images from both case and control populations were manually segmented to determine LAA volume.
For a fair evaluation and comparison with state-of-the-art approaches [13 15], the input images were manually segmented to only apply aerial perspective effect over the scene excluding the sky.
Neovessels and other components were manually segmented to build numerical models for mechanical analysis.
This multiwell plate was imaged in an average of 9 s per well, which corresponded to reading the whole plate in just over 14 min. As described above, each cell was manually segmented to extract only pixels near to the plasma membrane where FRET is expected to occur.
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The agent uses some images and their ground-truth (manually segmented) version to learn from.
Cells were manually segmented prior to analysis.
To assess co-localization of B cells within lymphatic vessels, IHC photographs were taken and then analyzed by dividing the number of yellow pixels by the total number of pixels in the manually segmented LN to determine the % of overlapping red and green pixels (Image-Pro Plus Version 5.4.0.2.9 (Media Cybernetics, Inc. Bethesda, MD, USA)).
For this, the set of manually segmented data has to be extended to include the additional layers and classifiers have to be trained on this data.
Pronator teres (PT), extensor carpi radialis brevis (ECRB), extensor pollicis longus (EPL), flexor carpi ulnaris (FCU), and brachioradialis (BR) muscles were manually segmented allowing volume to be calculated.
The set of background objects which have been manually segmented are considered to form the negative training samples, while the clean skulls are regarded as the positive training samples, as illustrated in Fig. 2. Therefore, the training set is composed of eight clean and eight segmented background objects resulting in ∼ 750,000 training vertex points for the two classes.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com