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As a result, individual SUVmean during infection could be underestimated by inclusion of voxels with lower metabolic activity from surrounding tissue when manually defining the LN boundaries on CT images (Figure 6e).

Each of the two types of VOIs was generated by manually defining the sphere centre from the images and then producing a spherical VOI mask based on the sphere radius.

Briefly, nuclear and whole cell intensities were collected by manually defining the nuclear and whole cell regions in each image, then collecting blank areas of equal size to represent the image background.

The process involved 1) manually defining the relative region of tumor occurrence, 2) thresholding the post-contrast T1-weighted images, both pre-treatment and post-treatment, in the 32 GBM patients, and 3) manually editing the resulting masks to exclude necrotic areas.

coagSODA, the GPU-accelerated simulator that we present and exploit in this work for the analysis of the BCC model, is a user-friendly and efficient tool that circumvents the need of manually defining the system of ODEs that describe the blood coagulation network.

Similar(55)

Firstly, we manually defined the six points of a standard face.

Once the raw data are in an acceptable video file format, we select a reference frame and manually define the rotation, if any, the crop indices (crop area), and the background for subtraction.

Each patient's T1-weighted MR image was co-registered to their 18 F-FDG PET using VINCI software (Max Planck Institute, Cologne, Germany) and subsequently used to manually define the regions of interest (ROIs) of the pons, occipital lobe, and cerebellum in normal subjects (Figure 1).

We manually define the cytotoxic conditions and select the genes using the computational model.

While data sets are available for Affymetrix chip for some species, for other platforms, such as the custom cDNA microarrays, one would need to manually define the gene sets, which can delay procurement of downstream information or introduce errors.

17 20–24 However, with this software the user must manually define the gland region for each patient.

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