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Virus phylogenetic analysis reveals two major monophyletic groups: hard tick and soft tick-vectored viruses.
The phylogeny of these eukaryote TLPs reveals three major monophyletic groups.
Six major monophyletic groups of LuPMEs could be defined based on the inferred relationships of flax genes and their presumed orthologs from other species.
Phylogenetic analyses of 18S rDNA data and combined 18S and 26S rDNA data from a broad range of chlorophyceans uncovered five major monophyletic groups in the Chlorophyceae: the Chlamydomonadales, Sphaeropleales, Oedogoniales, Chaetophorales, and Chaetopeltidales.
Based on the groups defined by Louvet et al.[ 41] for Arabidopsis PMEs, the branch length, and the bootstrap values (Additional file 4: Figure S2), six major monophyletic groups of PME could be defined (A, B, C, D, E, and F which correspond to groups 3, 1, 2, 1, 4, and 1 respectively in Louvet et al.[ 41]).
This paper had to do three logically distinct things: (1) better define major monophyletic groups, (2) better establish their correct branching order by cladistic reasoning, and (3) use transition analysis to polarize as many of the transitions between them as possible and thereby establish the position of the root.
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Only a major, monophyletic group containing the Z2g genes can be clearly defined, containing sequences of both catarrhines and platyrrhines.
Two major monophyletic haplotype groups were revealed in the Chinese population of P. nigromaculata: designated here as clade A and clade B (as shown in Fig. 2a).
A fraction of the core genomes (calculated with OrthoMCL, see below) of C. coli strains 317_04, RM2882, BIGS10 and 76339 (each representing one of the four major monophyletic phylogenetic groups) which showed orthologs in the outgroup species C. upsaliensis was selected.
The tree presents three major monophyletic clades, grouping each of the families described in the P superfamily, namely Galileo, 1360, and P element.
HMPV phylogenetic reconstructions revealed 5 main monophyletic groups corresponding with five major clades, one within sub-genotype B1, and two each within sub-genotypes A2 and B2 (labelled 1 5; Fig. 1B).
Related(13)
principal monophyletic groups
large monophyletic groups
main monophyletic groups
major eukaryotic groups
major green groups
major monophyletic Classes
major monophyletic classes
major monophyletic lineages
major monophyletic sublineages
major financial groups
major ethnic groups
major functional groups
major monophyletic clades
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Justyna Jupowicz-Kozak
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