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The main data structure is an array having the numbers of rows and columns equal to the size (in words) of the graph of memory accesses and, respectively, the size of the SPM.
The next section describes the algorithm SUFPREF that computes these equations using the overlap graph as a main data structure.
Basic notions on word overlaps are introduced, that lead to an overlap graph that is the main data structure to be used.
Space complexity The data stored consist of input data, temporary data used at the preprocessing step, the main data structure OvGraph and the working data unrelated to the OvGraph.
We anticipate that in 1 2 years solutions processing a 1 billion 100 bp reads collection in a few hours on a PC will appear, but their main data structure may be the good old suffix array rather than, e.g., the FM-index.
For an average analysis, we consider the average number based on a random uniform distribution of n characters from Σ. Concerning space usage, as described in Section "Description of the algorithm", the main data structure, the q-gram index built in line 1, uses an array with n - q + 1 integers and another with |Σ| q pointers/integers.
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The main data structures are defined as Java interfaces for which default implementations are provided.
In data-intensive signal processing applications, the main data structures from the behavioral specification are multi-dimensional arrays.
The Model maintains two main data structures that allow the identification of elements to be validated: a list of marked elements (marked_elements) and a list of affected elements (affected_elements).
Furthermore, as Andorra-I shares its main data structures with several PLP systems, we conclude that the methodology and techniques used in our work can greatly benefit these other PLP systems.
The main data structures used by the algorithm are: 2-D "cost" array C : each element C[i, j] (0≤i
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com