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Nineteen gene products were predicted to contain various domains and motifs, and found to be annotated with gene ontology codes.
Sequence similarity analyses against six public databases (Uniprot, NR, and COGs at NCBI, Pfam, InterPro, and KEGG) found that 61,636 unigenes can be annotated with gene descriptions, conserved protein domains, or gene ontology terms.
Similarly, those same SNPs can be annotated with gene information; the result is similar, except that the added column contains the name of the gene containing the SNP's position.
Sequence similarity analyses against six public databases (Uniprot, NR and COGs at NCBI, Pfam, InterPro and KEGG) found 55,088 unigenes that could be annotated with gene descriptions, conserved protein domains, or gene ontology terms.
As an example use for region based data, such as copy-number variation data, base pair start-and-stop regions can be provided to Biofilter, and then that data can be annotated with gene information using Biofilter, based on percent of overlap or number of base-pairs overlapped.
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We aim to increase the number of chemicals that can be annotated with genes by using next-gen TM instead of manual curation.
Regions identified were annotated with gene symbols by importing the annotation file from the UCSC genome browser (build hg18).
Regions identified were annotated with gene symbols by importing the annotation file from the NCBI RefSeq genome browser (build Hg19).
These were annotated with gene information using the relevant BioConductor annotation package (Dunning M, Lynch A and Eldridge M. illuminaHumanv4.db: Illumina HumanHT12v4 annotation data (chip illuminaHumanv4).
Among these unigenes, 35,276 were annotated with gene descriptions, conserved domains, gene ontology terms, and metabolic pathways.
The exonic de novo variations identified were annotated with gene information for the two patients (Tables 3 and 4).
Related(20)
be annotated with punctuation
be annotated with reference
be supplemented with gene
be identified with gene
be correlated with gene
be related with gene
be annotated with information
be equated with gene
be designed with gene
be associated with gene
be annotated with variance
be used with gene
be annotated with summary
be rescued with gene
be provided with gene
be annotated with effect
be treated with gene
be linked with gene
be annotated with barley
be combined with gene
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