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With an estimated proportion defective of 10% (i.e., P = 0.1) and target Δ of 2.5% (Δ = 0.025) we estimate the sample size of n = 553.
In W3 data set, pairs of environments with sample phenotypic correlations smaller than 0.1 had an estimated proportion of genomic variance explained by main effects that was smaller than 0.2.
A target sample size of 1,110 charts for each of maternal delivery and baby newborn (neonatal) discharges was based on achieving a precision of +/ – 3%% assuming (conservatively) an estimated proportion of 50%%.
Six out of these 9 Rip genes have an estimated proportion of sites under positive selection higher than 5%, with the highest level reached for RipAJ and RipG7, in agreement with a previous analysis [ 17]. aValues supporting evidence for recombination are shown in bold.
An estimated proportion of invariant sites was not used in the previous analysis because it had not been implemented in the used version of Bio++.
For each dataset, Maximum Likelihood (ML) phylogenetic trees were computed with PHYML using the JTT model and a gamma correction to take into account the heterogeneity of evolutionary rates across sites (4 discrete classes of sites, an estimated alpha parameter and an estimated proportion of invariable sites) [48].
PHYML trees were calculated using the Whelan and Goldman model, a gamma correction to take into account the heterogeneity of evolutionary rates across sites (four discrete classes of sites, an estimated alpha parameter, and an estimated proportion of invariable sites), and subtree pruning and regrafting topology searches.
ML analysis was performed using PhyML [84] with the JTT amino acid substitution model, 8 categories of substitution rates with an estimated Gamma distribution parameter and an estimated proportion of invariable sites.
Phylogenetic trees were generated from the aligned sequences using PhyML [ 74, 75] with the JTT substitution model, an estimated proportion of invariable sites, and an estimated gamma distribution parameter.
For all the alignments, we used the JTT model of evolution, frequencies estimated from the data set, an estimated proportion of invariant sites and eight gamma rate categories.
Therefore, the scale-up estimator produced an estimated proportion of heavy drug users of 3.3%9595% CI: 2.7, 4.1) (see Web Appendix).
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The phrase "an estimated proportion " functions as a modifier preceding a noun. It quantifies the noun with an approximation, indicating that the exact value is not known or not critical, but it is useful to indicate the magnitude. According to Ludwig AI, the phrase is correct and usable in written English.
Expression frequency: Very common
