Exact(3)
(E ) Alignment of chromosomal Red1 binding in rec8Δ mutants (blue) with regions exhibiting high coding density (red).
These plug-ins demonstrate how third-party developers can use JEnsembl to access data from Ensembl datasources, allowing the graphical display and alignment of chromosomal sequences, variations and exceptions, gene annotations and gene homologies.
Multiple alignment of chromosomal sequences identified SNPs and INDELs that could be used to estimate the relative similarity between the strains and the rates of genome evolution, which seem to be different for each individual strain [ 22].
Similar(5)
Genome alignments of chromosomal sequences were performed using Mauve software (Version 2.3.1) (Darling et al. 2004).
Global DNA alignments of chromosomal segments were performed using LAGAN [ 59] in a window of 100 bp with a minimum identity of 70%.
Conservation of gene order between closely related species permits the alignment of orthologous chromosomal segments.
Alignment of duplicated chromosomal regions revealed 100% identity of the nucleotide sequence (data not shown).
The global alignment of complete chromosomal sequences was performed by Mauve [ 61].
Related(1)
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