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Sapho — named after the juice that Mentats drank to turbo charge their mental activity in the sci-fi classic Dune, the idea here being that the app magically boosts your own data processing abilities at work — doesn't see that it has any direct competitors in the enterprise IT space at the moment.
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Source: Own data processing.
The system is also doing motion tracking of smartphone users' gait, again using sensors already embedded in phones, coupled with its own data processing.
Users should therefore be able to use CellNOptR as part of their own data processing pipeline, taking advantage of existing R/Bioconductor packages (e.g. for data normalization, visualization etc).
You input your own data.
And how do you analyse your own data?
You do your own experiments, reduce your own data, and write your own papers.
Import your own data by sending a POST command to http://host:8080/ambit2/dataset or using the web interface.
So owning your own data center will no longer define a company?
You obtain nuggets by forwarding packets from one node to another, and you spend them when you try to send your own data.
To run the same workflow on your own data, simply use the Galaxy upload features to load your own set of ChIP/control FASTQ files.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com