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A saturation plot of the combined dataset (ingroup only, without taxa with missing one or more loci) did not show signs of substitution saturation (Additional file 1), which was confirmed by a statistical test for saturation (Iss = 0.645, Iss.cSym = 0.844, p < 0.0001) [ 53]. a Consistency Index.
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Thus, the results of the analyses with and without outgroup taxa were consistent.
In ML analyses of all codon positions and 1st + 2nd sites, inclusion of the newly determined sequences from three Cupressophyta genomes halved the length of the internal branch subtending Gnetales and Cupressophyta when compared with phylogenetic reconstructions made without these taxa.
We conducted ordinations with and without data transformation, and with and without removing rare taxa (taxa present in ≤7 % of subsamples) prior to ordination.
Self-design restores hydrogeomorphology without inoculating wetland taxa into restoration sites.
Timing the divergences of the saltational taxa without a fossil record is, at best, imperfect.
Consuming different foods alters this bacterial community, and antibiotic treatment reduces overall bacterial populations and the relative abundance of specific bacterial taxa without directly influencing the host insect.
In many ways such thinking has been highly informative, as it is impossible to explain the biology of extinct taxa without first studying how living organisms operate.
The character-by-taxon matrix then automatically provided the mapping of EQ statements to individual taxa without further curator intervention being necessary.
The superior performance of our method is due to the penalty against distant topologies since cBrother needs to consider equally all (2n−5)!! topologies over n taxa without parental assumptions.
The holomorphic fungal genus Hypocrea/Trichoderma (Hypocreales, Ascomycota) contains several hundred species comprising both sexually propagating (Hypocrea) as well as apparently mitosporic (Trichoderma) taxa without observed ability to sexual reproduction.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com