Sentence examples for within the variant from inspiring English sources

More advanced haplotype-based methods incorporate the correlation between adjacent variants within the variant detection procedure.

EMSAs were carried out, as previously described, to determine transcription factor binding within the variant site (8).

However, clear electron density was observed for hexanoic acid within the variant proteins, consistent with the lack of detectable palmitic acid in the purified enzyme forms.

Indel detection accuracy is highly dependent on the bioinformatics data processing pipeline and the selection of parameters within the variant calling software [ 6].

Of interest, this multigene family shares sequence homology with other Plasmodium species and is included within the variant gene superfamily (Plasmodium interspersed repeats, pir) together with kir in P. knowlesi, and the cir/ yir/ bir family in P. chabaudi, P. yoelii and P. berghei[ 7, 8].

For each input variant, Veridical outputs the number of validating reads (i.e. RNA-Seq reads which corroborate the predicted splicing consequence) for a given splice consequence within the variant-containing tumour samples and within control samples (i.e. non-variant containing tumour samples and normal samples).

This time, 367 and 132 markers distributed in cluster on different chromosomes were found discriminant within J6 for the variant and the reference alleles, respectively.

The proportion of variants that increased risks, r%, was fixed at 100%, which means that all variants within the causal variants increase disease risk.

SIFT scores were not available for the missense variants in the PCLO gene but the variant within the KIAA1324-like gene was classified as tolerated (SIFT = 0.38).

Thus, the SVs genotype (homozygous or heterozygous) was defined based on the location of the variant within a given contig.

The variant within Gpr152 was also significantly associated with Tpcn2 expression levels, suggesting a potential interaction between these genes.