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This was in accordance with a previous study performed by Johnson et al. showing that the variation in performance between labs, protocols, and algorithms within the same array platform was greater than the variation in performance between array platforms [22].
Welch t-tests were performed to compare transformed normalized TF activity with TA within the same array and a modified meta-analysis method [65] was used to combine results from multiple arrays.
The SGH Array was tested for reproducibility both between arrays and within the same array.
Fourth, analyses of genes spotted in duplicate within the same array (technical replicates) showed almost identical fold changes, evidencing the strong reproducibility of our data.
Arrays were printed with replicate spots either within the same array or with replicate spots in an additional array on the same microarray slide.
Approximately 500 probesets appeared to have group specific values in any 5 array to 5 array comparison (p-value < 0.05) within the same array type.
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Because the experimental design employed here required directly, competitively hybridizing male and female samples to the same array, within-array normalization alone is sufficient when direct comparison of male versus female expression is made.
Such motifs, called irredundant motifs, are able to succinctly represent all of the other motifs occurring in the same array within reasonable time and space bounds.
To reduce bias because of array clustering, we calculated pair wise relatedness of all individuals caught in the same array, and then used the mean of those within-array measures to calculate within patch relatedness.
Live indie bands mirror the same array of music.
The same array radiates at various harmonic frequencies.
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