Sentence examples for with respect to alignment from inspiring English sources

Meanwhile, pre-aligned sequences in PHYLIP format can be accepted by PALM as input to fulfill user requests with respect to alignment from various perspectives.

progressiveMauve is an improvement with respect to alignment of positional homologs in multi-gene families, but a full characterization of limitations with respect to gene duplication remains for future work.

The three different categories follow a similar trend with respect to alignment length and average genetic distance per MSA.

Sequences were interrogated with respect to alignment, frequency of sequence recurrence and the presence of any Alu sequences.

"Hash size" (k-mer length for alignment) and "alignment candidate threshold" (minimal alignment length to map the read) parameters were pre-optimized prior to the analysis with respect to alignment sensitivity and time needed for the analysis.

Using a three-point scale (poor moderate good), the two readers evaluated image quality based on the presence of geometric distortion and breathing or swallowing artifacts, and they assessed areas of focal uptake with respect to alignment between PET and anatomic structures, quality of fusion, lesion conspicuity and anatomic location.

For gene-specific probes the same definition was used with respect to alignments to transcript sequences of one gene (instead of alignment to one transcript).

Average pairwise divergence between the two species was 0.0133, corresponding to an increase of 40% of their genetic divergence with respect to alignments including ORFs only (table 6).

Note that forward transitions are genomic transitions between a pair of aligned positions that lie on the same sequence (i.e. G, G′, S or S′) such that the order of alignment is preserved with respect to the alignment direction (e.g. when aligned to complementary strand order will be reverse as well).

The study established NATALIE as a top network alignment method with respect to both alignment quality and running time.

This finding is consistent with studies on Wikipedia [38] in which editors who display their party alignment on their profile show homophily with respect to this alignment when interacting through their user walls, but not through common discussions in talk pages (see Fig. 2).