Sentence examples for with reasonable alignment from inspiring English sources

Exact(1)

This resulted in 5,831 orthologous groups containing a member from each of the six species with reasonable alignment and 6,779 orthologous groups containing all five primate and rodent species.

Similar(58)

Trees were constructed for 1,265 gene families with reasonable alignments for more than 3 members.

A strong biasing field (several to many times stronger than the local geomagnetic field) will torque the magnetosome chains into reasonable alignment with the field direction like compass needles.

Unfinished (incompletely sequenced) clones are noted only where there was no reasonable alignment with a finished clone.

Although this approach managed to significantly reduce the simulation time, there is no guarantee that the aggregation of these partially optimal strings ends up with the global minimum and/or a reasonable alignment.

Despite the relatively modest level of sequence identity, a reasonable alignment could be made.

As the question under consideration concerns the divergence of specific genes and proteins over a (presumably) long time scale, the capacity to generate reasonable alignments diminishes with increasing time of divergence between types, conditional on the rate of substitution.

This and various other methods that have been devised to identify functional residues in proteins, such as residue interaction graphs (Amitai et al. 2004) or statistical methods reviewed by Ahola et al. (2004) could reasonably be used in conjunction with structure-based alignment methods to determine reasonable alignments based on functional considerations.

Many alignment methods often produce reasonable alignments which score worse than alignments with alternative templates.

We should construct multi-rate codon models that match the performance of REV in a statistical sense, with comparable likelihood scores, but with sufficiently few parameters to be computationally tractable and estimable from reasonable alignments.

This again is in agreement with the prediction that the use of alignment programs under default values, instead of using a single software under a range of parameters, results in biologically reasonable alignments that do not contradict previous taxonomic knowledge.

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