Sentence examples for with prior setting from inspiring English sources
The phrase "with prior setting" is not standard in written English and may cause confusion.
It could be used in contexts where you want to refer to a previously established context or arrangement, but it would be clearer to rephrase it. Example: "The experiment was conducted with prior setting to ensure consistency in results."
Kamaboko gel with prior setting at 40°C.
As a consequence, the lower degradation took place in kamaboko gel with prior setting.
For deformation, it was noted that kamaboko gels, either with prior setting at 25°C or 40°C, showed the lower values than both directly heated gel and modori gel (p < 0.05).
Kamaboko gel with prior setting at 40°C (K40) exhibited the highest breaking force, followed by another kamaboko gel having setting temperature of 25°C, directly heated gel and modori gel, respectively (p < 0.05).
Since the degree of current gene flow between D. parvula and D. retrocurva is unknown we ran two IMa analyses, one with the migration prior set to zero migrants per generation and another with ten migrants per generation between the two species which we treated as populations.
The best-scoring ML tree from the 12n3rRTn dataset was used for divergence time estimation, and ML estimates of branch lengths were obtained using the BASEML program in PAML under the GTR+Γ substitution model with the gamma prior set at 0.2.
The divergence time (t) was estimated to be at 20,600 years ago when the migration prior was set to zero migrants/generation, and 31,000 years ago with a migration prior set at 10 migrants/generation (Fig. 8).
The ML estimates of branch lengths were obtained using BASEML and CODEML (in PAML) programs under the GTR + Γ5 and MTREVF + Γ5 substitution models [ 54] for the 12nRTn and 123a data sets, respectively, with the gamma prior set at 0.5.
We evaluated the robustness of our inferences by running a second analysis with an alternative set of priors (prior set 2 in Table S2) and by estimating the posterior probabilities of scenarios using the 0.1% or 1% closest simulated data sets for both sets of priors (Table S2).
Because MrBayes default branch length priors and starting tree branch length priors may lead to a gross overestimation of tree length [ 106, 107], we conducted additional analyses with the starting tree branch length prior set to 0.001 and the prior on the branch length set to 0.01.
CART software (Salford Systems, San Diego, CA) was used in our analysis with equal prior setting and a 10-fold cross validation.
