Sentence examples for with active marks from inspiring English sources

cis-NAT genes are the most likely to be enriched with active marks, followed by non-NAT and then trans-NAT genes.

To confirm the robustness of the selected subsets, we also applied a second procedure to select repressed RTSSs with active marks.

In contrast, H3K27me3 had an overall very low concordance with active marks and was equally distributed over the promoter regions with only slight decline at transcription start site.

We thus conclude that the selected subsets represent a robust selection of repressed RTSSs with active marks in each cell line.

Yet the promoters of those genes are frequently decorated with Polycomb-specific marks (H3K27me3) as well as with active marks (H3K4me3) and are referred to as "bivalent promoters".

In contrast, only 20% of HNF4A sites enriched in the mutant overlap with CRMs of which only 4% are conserved and they show lesser association with active marks.

Co-operativity of H2A.Z with other "active" marks (code 1) (Additional file 1: Figure S5B), agrees with the observation that codes 1 and 3 are relatively uncorrelated (Additional file 1: Figure S6B).

Promoters of expressed genes are commonly associated with the active marks, such as H3 lysine 4 dimethylation (H3K4me2) and H3 lysine 9 acetylation (H3K9acetyl).

Whereas a large proportion of CTCF/RAD21 marked sites were devoid of additional RF binding, a subset displayed near ubiquitous POLR2A and RF binding with accompanying active marks in the four cell lines for which chromatin tracks were available.

One possible explanation is that in keratinocytes, regions of the genome that have a functional p63 motif are on average more accessible and marked with active chromatin marks.

Most of these peaks (62 of 64) were associated with the three active marks, and only two peaks associated with the repressive mark H3K27me3.