Many classic HPC-markers, such as keratin (K 7 and K19, have a shared expression with cholangiocytes, which underlines the significance of combining the interpretation of marker expression with histological evaluation.
For transcripts with shared expression, a Pearson's correlation coefficient of read counts was calculated between tissues to identify how broadly similar expression was between liver and gill among the set of common active genes.
However, most of these genes that were differentially expressed between house finch populations have an average level of expression that is low compared with genes that shared expression between populations (mean TPM of 0.41 versus 0.46 in AL and 0.36 versus 0.42 in AZ).
Attempts to associate molecular expression data with morphological structures (e.g. [ 18]) also place the Gnetales and conifers together, with shared expression of orthologous genes indicating that the Gnetum strobilar collar and ovule are homologous to the conifer bract-and-ovule/ovuliferous scale complex.
Furthermore, GmWRKYs with high sequence similarity and shared expression profiles represent good candidates for evaluation of gene functions in soybean.
By contrast, GmMYBs with high sequence similarity and shared expression profiles represent good candidates for evaluation of gene functions in soybean.
Indeed, it has been shown that under controlled in vitro conditions macrophages respond to a broad range of bacteria with a shared gene expression pattern [1] and similar findings have been described for dendritic cells [2] and peripheral blood mononuclear cells [3].
In an attempt to identify expression of uncharacterized genes and infer possible function for these genes we selected one of these clusters and investigated the shared expression patterns with known genes and cDNA sequences.
There were also certain shared expression characteristics with progenitor cells, mesenchymal cells and myoepithelial cells.
The CD31+/CD41−/CD45− population of the endocardium shared expression of haematopoietic genes with other endothelial populations, including Cbfa2t3, Kit, Klf1, Mll1, Pbx1 and Scl/Tal1 (Supplementary Fig. S5c, Supplementary Table S1).
