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A combination of bit-wise network coding and channel decoding is considered in [10].
A strategy based on symbol-wise network coding, in which two modulated symbols with different modulation types directly being mapped to a transmitted signal at the relay is investigated in [9].
Similarly to the gene-wise network, also the community-wise network can also be mapped out by assigning each node to a community.
The automatic method was employed for block-wise network construction and module detection.
For example, MaWISH (Koyuturk et al., 2006), which implements a duplication divergence model to carry out pair-wise network alignment.
Krishna et al. [ 34] proposed a Granger causality clustering method based on the structure of a pair-wise network.
Figure 1 shows the gene-wise network in which each node is a gene, and each color is referred to as a specific community.
For a more direct quantifier of functional diversifiability in the context of biochemical networks, we evaluated pair-wise network distances among proteins.
Clustering coefficients (%, on diagonals) and percent overlap computed from the ratio of common links divided by the total number of unique links for positive (above diagonal) and negative (below diagonal) links across each pair-wise network comparison.
There is an edge connecting two communities only if the IS is different from 0. We obtained a community-wise network composed of 90 communities represented as nodes and 237 interactions.
To demonstrate that our probe-wise to gene-wise network transformation was robust and comparable with the custom CDF approach, we chose as a case of study the three cancer cell line networks presented in the Section 3.8.
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