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Each log-ratio dataset (from duplicate or triplicate samples) was used to identify TF-binding regions using the software (width of sliding window = 300 bp).
RNAP, RpoD, and RpoS binding sites were identified from similar log ratio data sets from triplicate chromatin immunoprecipitation (ChIP) samples using NimbleScan software (width of sliding window: 300 bp).
Similar(58)
Before SOM analysis, the observed time-course data for 58 metabolites (including an estimate of S17P) were smoothed by averaging the adjacent data points using a sliding window of width 3, to reduce high-frequency noise presumably originating from individual differences in plant seedlings, rapid oscillations in metabolism, or measurement errors.
(6 where M = k × f s is the width of the sliding Hanning window, k is the time length of the window, f s is the sampling frequency, δ = j × f s is the sliding distance, and j is the time length of the sliding step.
The width of the sliding plate in contact with the MR fluid is 50mm.
For each starting range cell k, the width of the sliding window Δ w is adjusted between L min and L max.
"The draperies were mounted as high as practically possible to span the width of the sliding doors and the grass shade prevents the eye from climbing any higher," he says.
The output activity of each population is taken to be a discrete stochastic variable (A_{alpha}(t)) given by A_{alpha}(t)=frac{{mathcal{N}}_{alpha}(t)}{{mathcal{N}}Delta t}, (2.1) where ({mathcal{N}}_{alpha}(t)) is the number of neurons in the αth population that fired in the time interval ([t-Delta t,t]), and Δt is the width of a sliding window that counts spikes.
The width of each sliding window was equal to the length of its matching input PWM.
(w) Width of the sliding measurement window.
In addition, the width of the sliding track increases due to wear.
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