Many substantial advances have been made in phylogenetic methods, including the development of sophisticated evolutionary models, tree-building techniques (including faster tools suited to the analysis of genome-wide data sets) and reliability estimates of tree inferences, as well as databases and other computational tools.
JHW, YJS and KWC assembled the genome-wide data set and carried out the analyses.
TLR genes exhibited comparable variation in the species-wide data set and their average π was about 0.8 of that for 62 3′-UTRs (table 2 and supplementary fig. S5, Supplementary Material online).
In summary, cloneHD was applied to a time-resolved genome-wide data set and recovered an evolutionary history as was inferred using targeted deep sequencing (Schuh et al., 2012).
Small, wide data sets are commonplace in human immunophenotyping research.
We offer a set of prescriptions that are designed to facilitate low-variance (i.e. stable), low-bias, interpretive regression modeling of small, wide data sets.
Comparative studies of genome wide data sets are entirely dependent on the choice of common denominator for annotation [ 40].
Mining the numerous genome wide data sets related to protein function to retrieve potential candidate genes for a particular biological process remains a challenge.
Presented principles and methods are illustrated through application to a small, wide data set of adults spanning a wide range in ages and multiple immunophenotypes that were assayed before and after immunization with inactivated influenza vaccine (IIV).
Two cross-disorder genetic association tests were performed on the genome-wide data sets of ASD and six autoimmune disorders.
botkeeper leverages these advanced computer science techniques to analyze diverse company-wide data sets, categorize expenses, and execute timely accounting actions automatically – all with 99.97% accuracy," said Enrico Palmerino, chief executive at botkeeper in a statement.
