Sentence examples for which sequences from from inspiring English sources
To investigate the SecG role in adhesion and cell motility we generated SecG deficient cells in strain AX2 using a gene replacement vector in which sequences from position 576 to 2083 of the coding sequence encoding 10 of the predicted 15 ankyrin repeats and the first half of the Sec7 domain (amino acid residues 192 to 695) were replaced by the selection cassette.
Also, the combined framework will serve as a reference onto which sequences from other potato genotypes, including tetraploids, can be placed.
Following Sakuraba et al. (2008), we defined LCNS as regions spanning at least 500 bp in which sequences from two species share at least 95% identity and we extend this definition to encompass multispecies comparisons.
Independent data sets were created for Uba1 and Cdc48, for which sequences from vertebrates, invertebrates, fungi, chlorophytes and land plants, a rhodophyte, and several representatives from the chromalveolates (cryptophytes, haptophytes, diatoms, pelagophytes, oomycetes, ciliates, and alveolates) were included.
Next, two alternating steps are performed iteratively: the cluster extension step, in which sequences from the pool are inserted into clusters, and the cluster merging step, in which whole clusters are compared and merged.
Accurate species identifications will be dependent upon comprehensive barcode databases, as sequences from unrepresented species cannot be reliably placed into higher taxonomic groups for which sequences from other species are available.
In cases in which sequence from a zebra finch LCNS overlapped a song transcript in the zebra finch genome, the LCNS have been annotated with the name of the song transcript.
After an assembly is created, an additional challenge is "metagenomic deconvolution", or determining which sequences come from which species in the sample.
If that is correct, this result is likely to underrepresent the extent to which sequences derived from mobile elements are present in this set of trees.
*indicates material for which sequences were obtained from NCBI GenBank.
1) A χ2 test was performed in TREEPUZZLE to ascertain which sequences deviated significantly from average amino acid composition.
