Indeed, the dataset associated with the stiffer soil condition (i.e., the Kefalonia rock site; V S30 ~ 830 m/s) showed the lowest torsion with respect to rocking and PGTA, whereas the datasets associated with the softer soil conditions (Kefalonia soft-soil site, Yin et al. 2016; V S30 ~ 250, 280 m/s, respectively) showed the highest torsion.
This may be because CADD is trained to differentiate high-frequency alleles from simulated variants of equal frequencies, whereas the datasets under test often contain a range of allele frequencies.
We used a normalized AERS dataset, in which the drug names are normalized using standard drug ontologies RxNorm and NDF-RT and the ADEs are normalized using MedDRA, whereas the datasets from SIDER and PharmGKB used STITCH compound IDs to code drug names and used UMLS CUIs to code ADEs.
With dataset 1, the ground plane in depth image has a large area; whereas the dataset 2 ground only takes a small area, as can be seen in Fig. 19.
The three cancer datasets not showing associations between TIN-estimates and expression levels of splicing factors had similar quality control metrics to the other datasets, whereas the dataset showing most deviance during quality control (cervical cancer), showed strong associations.
To understand the result, in the case of the LCK domain, we have experimental evidence only for 150 positive interactions, whereas the dataset for the six domains has a total of 910 nonredundant peptides involved in positive interactions.
The microarray dataset GSE40627 reports expression of genes in the leaves under drought stress imposed at late developmental stages (V6 and R2), whereas the dataset GSE41125 describes expression of genes in 14 d seedlings utilizing pooled RNA samples from 0, 3, 6, 12 and 24 hr of mock and salinity stressed plants.
A total of 94 coronary events occurred (75 angina, 25 MI, and two sudden cardiac deaths; eight had both angina and MI) in the BP dataset, whereas the TC dataset contained 86 coronary events (71 angina, 20 MI, and two sudden cardiac deaths; seven had both angina and MI).
It is important to note that a multi-core approach does not improve the performance of operations that are limited by local disk or network throughputs, whereas splitting the dataset and using multi-node parallelization is not generally bound by these constraints.
Among the samples analyzed here, therefore, we expected that the human datasets would represent measures of genetically heterogenous individuals, whereas the mouse datasets would often come from inbred lines.
Finally, we note that the kidney and lung datasets analyzed here contain multiple sections of a solid tumor obtained at a single time point, whereas the CLL datasets contain samples obtained at different times.
