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This example also shows that the annotation schema does not distinguish between DNA and protein mutations, whereas the database does.
Decisions to include or exclude studies were made by two authors, whereas the database search was conducted by just one author.
The MRI literature is partially supportive for the first three applications, whereas the database for the last two applications is still growing [ 5- 7].
The squid light organ database is dominated by signal transduction (67%) and membrane-associated proteins (49%), whereas the database of the rat heart is dominated by cell growth and maintenance (63%) and intracellular activities (70%).
In fact, as previously shown, whereas the database on environmental factors impinging on DNA methylation in human leukocytes is already abundant, very few data exist on the variables affecting DNA methylation in human germ cells, even in the most easily accessible sperm.
Similar(55)
There are only two databases, KEGG and Applied Biosystems, which manually annotate the disease-specific information with each protein of the pathways, whereas the databases NetPath, WikiPathways, InnateDB and BIOCARTA simply hyper-link the protein-disease information with another popular disease-specific database OMIM (69).
The Plant Pathogen Transcript Assemblies, rDNA database and Genome Warehouse use three separate MySQL relational databases with custom schemas, whereas the Annotation database uses the Chado schema made available by the Generic Model Organism Database (GMOD) Project that develops and deploys open-source software for genome sequence, annotation and analysis projects (36).
Whereas the CDSC database is person-based, the TCR database is tumour-based.
The hospital discharge database captures all hospital admissions among Ontario residents, whereas the claims database includes claims from approximately 98% of Ontario physicians because of the universal nature of the provincial medicare system (Chan 2000; Lipscombe and Hux 2007).
For example, a data analyst will solely be interested in data from the database, whereas the accountant will require data insights provided through the webserver.
The preponderance of plants and animals simply reflects the largely biased composition of the database, whereas the next fraction in abundance corresponds to dinoflagellates in spite of the comparatively low representation of these protists in the database.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com