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For histones, 15% SDS PAGE gels were run using Laemmli buffer.
Both stages were run using default settings and also incorporated the Pfam vr.
The molecular simulations were run using a modified version of Gromacs 4.0.551.
A number of scenarios were run using the FCM inference process.
Regressions were run using linear probability models clustered by agency.
Linear models for association analysis were run using the R statistical package (version 2.14, www.r-project.org/).org/
Simulations were run using the different fracturing fluids and injection rates.
Batches with varying amounts of catalyst were run using the same reaction conditions.
Several simulations were run using injected solvents containing methane and propane only.
All routines were run using the Matlab R2009a which is based on an Intel 2.00GHz CPU.
LP, BR, RAk EL, and CLR were run using a SVM as the base classifier.
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