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An alternative hypothesis is that duplicated sequences within the rhesus assembly were not assembled in the chromosome scaffolds and were instead placed in the "chromosome unknown" or chrUr bin.
a The genomic regions which were not assembled in 454/Draft assembly are listed above; b the 'x' coverage defines the raw-read coverage averaged over given coordinates; c 'Complete/partial' contig coverage defines whether the region was completely/partially assembled while 'None' defines that this region is missing in the respective assembly.
Moreover, the adventitial TLT were not assembled in a cluster but rather split apart, suggesting that each of the adventitial TLT displayed original, "stochastic", perturbations of the TCR repertoire.
More interestingly the adventitial TLT, were not assembled in a cluster but rather split apart (as assessed by the hierarchical tree in Figure 2D), suggesting that each of the adventitial TLT displayed original, "stochastic", perturbations of the TCR repertoire.
In many cases, Unigenes showing the same Arabidopsis hit did not overlap, indicating that they may derive from the same transcript but were not assembled in the same contig, and therefore cannot be considered to be different genes.
Contigs including the sequence corresponding to VTH1/ VTH2, which are paralogous and nearly indistinguishable from each other, were not assembled in the supercontigs, presumably due to adjacent repetitive sequences.
Similar(51)
We performed a second iteration of this analysis using the result of the first assembly as the reference in cases where the whole insert region was not assembled in a single contig during the first round of assembly.
We convinced shop managers that no product HDS built required more than 30 days if it was not assembled in batches.
Although each agr type was not assembled in the MLST tree, the data confirmed the previously described findings [41].
Similar to coa, all strains of a given CC were classified into the same agr group although each agr types was not assembled in the MLST tree.
They used the UMD data just in case the segment was not assembled in Btau.
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