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At the species level, as expected, the haplotypes were mostly congruent with each taxon, indicating complete lineage sorting for both the ITS and the DTHK.
Individuals were assigned to species based on the overall structure of the mtDNA gene tree, in which case well-supported haploclades were mostly congruent with the geographic subdivision seen in the SFR valley, resulting in a total of ten lineages for the ingroup (see Results).
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Trees inferred from nucleotide and aminoacid sequences are mostly congruent, with few exceptions confined to poorly supported nodes.
Even so, the main clades retrieved in that study are mostly congruent with clades in our tree.
In addition, more than 50% of the joint space was maintained, and the femoral head was mostly congruent with the acetabulum.
Therefore our data are mostly congruent with the definition of 7 (mtDNA) or 8 (ncDNA) phylogenetic or cohesion species [ 27, 16].
Interordinal relationships within each clade are mostly congruent with results from prior studies (Le Gall and Saunders 2007; Le Gall et al. 2010; Verbruggen et al. 2010).
Estimates of migration rates (individuals per generation) between genetically-delimited populations appear to be mostly congruent with features of the landscape, with variation among migration rates associated to migratory barriers or conduits.
The mitogenomic phylogenetic reconstruction obtained with Bayesian inference methods [ 25, 26] is mostly congruent with previous comprehensive analyses from nuclear and mtDNA genes [ 27] where mammalian species form four major groups: Laurasiatheria, Euarchontoglires, Xenarthra, and Afrotheria.
While from a topological standpoint the evolutionary history of ariines is mostly congruent with vicariance associated with the sequence of events during Gondwanan fragmentation, ambiguous divergence time estimations hinders assessing the vicariant hypothesis on a temporal framework.
The marker order was mostly congruent with the previously mapping information, except for Sma-USC225, whose estimated position required several double recombinants in a small region to explain our observations.
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