Exact(14)
All the parameters were kept as default except the maximum number of Epochs was set to 42 to reduce the computational time complexity.
The GTR (General Time Reversible)+I (Invariable sites) model with gamma-distributed rate variation across sites and a proportion of invariable sites, was specifically used and other parameters were kept as default.
All other settings were kept as default.
All other parameters were kept as default.
All settings were kept as default except where indicated below.
Other parameters were kept as default for system equilibration.
Similar(46)
The majority of settings and parameters were kept as the defaults from the codonml.ctl file distributed with PAML 4.8.
Data were kept as confidential.
All the operators were kept at default settings.
The other docking parameters were kept at default values.
The pipeline parameters were kept at default settings.
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