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Target proteins were identified using Uniprot identifiers, indications and adverse drug reactions were identified using Unified Medical Language System UMLSS) terms.
The fragment masses were identified using MASCOT searches.
Potential source papers were identified using the Web of Science.
Their orthologs in phage genomes were identified using BlastN48.
The S. sanguinis orthologs were identified using BLASTP.
The tRNA genes were identified using tRNAscan-SE53 and RAST.
Differentially expressed genes were identified using the edgeR R package.
Outliers were identified using the ROUT method, Q = 1%.
SNPs were identified using samtools mpileup and bcftools.
These three drivers were identified using a decision tree analysis.
Permenantly inundated areas were identified using VMAP 0) data.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com